Commit 924785ca authored by khalid's avatar khalid
Browse files

change pca varprop name

parent 1b20c460
......@@ -6,7 +6,7 @@ rule <step_name>__pca_gds:
output:
eigenvectors = config["results_dir"] + "/" + config["<step_name>__pca_gds_output_dir"] + "/" + <step_name>__pca_gds_gds_name + "_eigenvects.txt",
eigenvalues = config["results_dir"] + "/" + config["<step_name>__pca_gds_output_dir"] + "/" + <step_name>__pca_gds_gds_name + "_eigenvals.txt",
varprop = config["results_dir"] + "/" + config["<step_name>__pca_gds_output_dir"] + "/varprop_mqc.txt",
varprop = config["results_dir"] + "/" + config["<step_name>__pca_gds_output_dir"] + "/pca_varprop_mqc.txt",
pca_png = config["results_dir"] + "/" + config["<step_name>__pca_gds_output_dir"] + "/pca_topaxes_plot_mqc.png",
axe1axe2_png = config["results_dir"] + "/" + config["<step_name>__pca_gds_output_dir"] + "/pca_axe1axe2_plot_mqc.png",
params:
......
......@@ -21,7 +21,7 @@
outputs: [
{ name: eigenvectors, type: "txt", file: "*_eigenvects.txt", description: "Eigenvectors" },
{ name: eigenvalues, type: "txt", file: "*_eigenvals.txt", description: "Eigenvalues" },
{ name: varprop, type: "txt", file: "varprop_mqc.txt", description: "variance proportion " },
{ name: varprop, type: "txt", file: "pca_varprop_mqc.txt", description: "variance proportion " },
{ name: pca_png, type: "png", file: "pca_topaxes_plot_mqc.png", description: "First 6 eigenvectors plots" },
{ name: axe1axe2_png, type: "png", file: "pca_axe1axe2_plot_mqc.png", description: "First 2 eigenvectors plots" },
],
......
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