Addition of tabs in Help->Documentation

Addition of tabs in Help->Documentation for the Reference guide & Tutorial &changes in 2 HLP files.

src/fr/ird/climprod/AnyPlatformAppPDF.java

+package fr.ird.climprod;
+
+// Permet l'ouverture d'un fichier pdf quelle que soit la plateforme (Linux, Mac, Windows).
+
+import java.awt.Desktop;
+import java.io.File;
+
+public class AnyPlatformAppPDF {
+    
+    public static void mainPDF(String PDFpathfilename) {
+      try {
+       File pdfFile = new File(PDFpathfilename);
+        if (pdfFile.exists()) {
+
+            if (Desktop.isDesktopSupported()) {
+                Desktop.getDesktop().open(pdfFile);
+            } else {
+                System.out.println("Awt Desktop is not supported!");
+            }
+        } else {
+            System.out.println("PDF file does not exist!");
+            MsgDialogBox msg = new MsgDialogBox(0, "PDF file not found.\nPlease check if there are pdf files in your directory\nC:/Program Files/CLIMPROD_5.0/Documents/\nIf not please uninstall and resinstall CLIMPROD\nand accept the default location of the software.\nYour data files will not be lost.", 0, Global.CadreMain);
+        }
+      } catch (Exception ex) {
+        ex.printStackTrace();
+      }
+    }
+} 
+

src/fr/ird/climprod/Application.java

+// Tentative de suppression ligne incommplète dans fichier input data .CLI 
+// Ne marche pas complètement.
+package fr.ird.climprod;
+import java.awt.*;
+import java.awt.event.*;
+import javax.swing.*;
+import javax.swing.table.*;
+public class Application extends JFrame {
+   private JTable table;
+   private DefaultTableModel model;
+   private Object[][] data;
+   private String[] columnNames;
+   private JButton button;
+   public Application() {
+      setTitle("RemoveSelectedRow Test");
+      data = new Object[][] {{"101", "Ramesh"}, {"102", "Adithya"}, {"103", "Jai"}, {"104", "Sai"}};
+      columnNames = new String[] {"ID", "Name"};
+      model = new DefaultTableModel(data, columnNames);
+      table = new JTable(model);
+      table.setSelectionMode(javax.swing.ListSelectionModel.SINGLE_SELECTION);
+      button = new JButton("Remove");
+      button.addActionListener(new ActionListener() {
+         @Override
+         public void actionPerformed(ActionEvent ae) {
+            // check for selected row first
+            if(table.getSelectedRow() != -1) {
+               // remove selected row from the model
+               model.removeRow(table.getSelectedRow());
+               JOptionPane.showMessageDialog(null, "Selected row deleted successfully");
+            }
+         }
+      });
+      add(new JScrollPane(table), BorderLayout.CENTER);
+      add(button, BorderLayout.SOUTH);
+      setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE);
+      setSize(400, 300);
+      setLocationRelativeTo(null);
+      setVisible(true);
+   }
+   public static void main(String args[]) {
+      new Application();
+   }
+}
+

src/fr/ird/climprod/CadreMain.java

@@ -8,6 +8,8 @@ import java.awt.event.*;
 import javax.swing.*;
 
 import java.io.*;
+import java.net.URL;
+import java.io.IOException;
 
 import javax.swing.filechooser.FileFilter;
 import java.util.StringTokenizer;
@@ -23,11 +25,17 @@ public class CadreMain extends JFrame {
     JPanel contentPane;
     JMenuBar menuBar1 = new JMenuBar();
     JMenu menuFile = new JMenu();
-    JMenuItem menuFileExit = new JMenuItem();
+        JMenuItem menuFileExit = new JMenuItem();
+    
     JMenu menuHelp = new JMenu();
-    JMenuItem menuHelpAbout = new JMenuItem();
-    JMenuItem menuHelpReferences = new JMenuItem();
-    JMenuItem menuHelpHowTo = new JMenuItem();
+        JMenuItem menuHelpHowTo = new JMenuItem();
+        JMenuItem menuHelpReferences = new JMenuItem();
+        JMenuItem menuHelpAbout = new JMenuItem();
+    
+    JMenu menuHelpDoc = new JMenu();
+        JMenuItem submenuTuto = new JMenuItem(); //"Tutorial"
+        JMenuItem submenuGuide = new JMenuItem(); // "Reference guide" 
+    
     JMenuItem menuFileOpen = new JMenuItem();
     JMenuItem menuFileCreate = new JMenuItem();
     JMenuItem menuFileFolder = new JMenuItem();
@@ -37,7 +45,7 @@ public class CadreMain extends JFrame {
 
     JMenu menuPlots = new JMenu();
     JMenuItem menuPlotTime = new JMenuItem();
-	JMenuItem menuPlotHistogr = new JMenuItem();
+    JMenuItem menuPlotHistogr = new JMenuItem();
     JMenuItem menuPlotBivariate = new JMenuItem();
     JMenuItem menuPlotFitted = new JMenuItem();
     JMenuItem menuPlotResiduals = new JMenuItem();
@@ -101,7 +109,7 @@ public class CadreMain extends JFrame {
                 System.exit(0);
             }
             TexteRegles.initScript(inRegle, inComment);
-            
+                                   
             InputStream inRep = CadreMain.class.getResourceAsStream("resources/Arbre_decisions.csv");
             if (inRep == null) {
                 MsgDialogBox msg = new MsgDialogBox(0, "FATAL ERROR\nFile Arbre_decisions.csv not found", 0, this);
@@ -147,7 +155,7 @@ public class CadreMain extends JFrame {
         this.setIconImage(Toolkit.getDefaultToolkit().createImage(CadreMain.class.getResource("resources/images/Climprod.jpg")));
         contentPane = (JPanel) this.getContentPane();
         contentPane.setLayout(new GridLayout(1, 2));
-        this.setTitle("Climprod beta-5.0"); // beta version ici
+        this.setTitle("Climprod 5.2 beta"); // beta version ici
         this.addWindowListener(new java.awt.event.WindowAdapter() {
 
             public void windowActivated(WindowEvent e) {
@@ -181,7 +189,34 @@ public class CadreMain extends JFrame {
                 helpHowTo_actionPerformed(e);
             }
         }); 
-                
+        menuHelpDoc.setText("Documentation");
+        menuHelpDoc.setMnemonic(KeyEvent.VK_D);
+        menuHelpDoc.addActionListener(new ActionListener() {
+
+            @Override
+            public void actionPerformed(ActionEvent e) {
+                HelpDoc_actionPerformed(e);
+            }
+        });
+        submenuTuto.setText("Tutorial");
+        submenuTuto.setMnemonic(KeyEvent.VK_T);
+        submenuTuto.addActionListener(new ActionListener() {
+
+            @Override
+            public void actionPerformed(ActionEvent e) {
+                DocTuto_actionPerformed(e);
+            }
+        });        
+        submenuGuide.setText("Reference guide");
+        submenuGuide.setMnemonic(KeyEvent.VK_G);
+        submenuGuide.addActionListener(new ActionListener() {
+
+            @Override
+            public void actionPerformed(ActionEvent e) {
+                DocGuide_actionPerformed(e);
+            }
+        });
+        
         menuHelpReferences.setText("References");
         menuHelpReferences.setMnemonic(KeyEvent.VK_R);
         menuHelpReferences.addActionListener(new ActionListener() {
@@ -213,7 +248,7 @@ public class CadreMain extends JFrame {
             }
         });
 
-        menuFileCreate.setText("Create a new Climprod data file");
+        menuFileCreate.setText("Create a new CLIMPROD data file");
         menuFileCreate.setMnemonic(KeyEvent.VK_C);
         menuFileCreate.setAccelerator(KeyStroke.getKeyStroke(KeyEvent.VK_C,InputEvent.CTRL_DOWN_MASK));
         menuFileCreate.addActionListener(new java.awt.event.ActionListener() {
@@ -224,7 +259,7 @@ public class CadreMain extends JFrame {
             }
         });
 
-        menuFileFolder.setText("Build a history html & graphs folder");
+        menuFileFolder.setText("Build a history html & graphs directory");
         menuFileFolder.setMnemonic(KeyEvent.VK_M);
         menuFileFolder.setAccelerator(KeyStroke.getKeyStroke(KeyEvent.VK_M,InputEvent.CTRL_DOWN_MASK));
         menuFileFolder.addActionListener(new java.awt.event.ActionListener() {
@@ -391,7 +426,7 @@ public class CadreMain extends JFrame {
                 menuModelsResults_actionPerformed(e);
             }
         });
-        menuFileOpenFolder.setText("Open an existing html & graphs folder");
+        menuFileOpenFolder.setText("Open an existing html & graphs directory");
         menuPlots.add(menuPlotTime);
         menuPlots.add(menuPlotHistogr);
         menuPlots.add(menuPlotBivariate);
@@ -400,6 +435,7 @@ public class CadreMain extends JFrame {
         menuPlots.add(menuPlotJacknife);
         menuPlots.add(menuPlotThreeVariate);
         menuPlots.add(menuPlotMsy);
+
         menuModels.add(menuModelsSelect);
         menuModels.add(menuModelsDirectly);
         menuModels.addSeparator();
@@ -408,6 +444,7 @@ public class CadreMain extends JFrame {
         menuModels.add(menuModelsResults);
 
         menuOptions.add(menuOptionsBavard);
+
         menuFile.add(menuFileOpen);
         menuFile.add(menuFileCreate);
         menuFile.add(menuFileExit);
@@ -416,8 +453,12 @@ public class CadreMain extends JFrame {
         menuFile.add(menuFileOpenFolder);
 
         menuHelp.add(menuHelpHowTo);
+        menuHelp.add(menuHelpDoc);        
+            menuHelpDoc.add(submenuTuto); //Adding menu items to the sub-menu
+            menuHelpDoc.add(submenuGuide);
         menuHelp.add(menuHelpReferences);
         menuHelp.add(menuHelpAbout);
+
         menuBar1.add(menuFile);
         menuBar1.add(menuModels);
         menuBar1.add(menuPlots);
@@ -508,7 +549,50 @@ public class CadreMain extends JFrame {
 	    dlg.setModal(true);
         dlg.setVisible(true);
     }
+ 
+    public void HelpDoc_actionPerformed(ActionEvent e) {
+    }
+    
+    public void DocTuto_actionPerformed(ActionEvent e) {
+    //File pdfFile = new File(getClass().getClassLoader().getResource("Freon_et_al_FAO_Manuel_Climprod_1993.pdf").getFile()); // Ne marche pas, à réparer pour lire fichier pdf dans climprod\resources?
+    //AnyPlatformAppPDF.mainPDF(getClass().getClassLoader().getResource("Freon_et_al_FAO_Manuel_Climprod_1993.pdf").getFile()); // Ne marche pas, à réparer pour lire fichier pdf dans climprod\resources?
+    AnyPlatformAppPDF.mainPDF("C:/Program Files/CLIMPROD_5.0/Documents/Tutorial_CLIMPROD_5.0.pdf");
+    //jarPDF(); // Ne marche pas, à réparer pour lire fichier pdf dans climprod\resources?
+    }
     
+    public void DocGuide_actionPerformed(ActionEvent e) {
+        AnyPlatformAppPDF.mainPDF("C:/Program Files/CLIMPROD_5.0/Documents/Reference_Guide_CLIMPROD_5.0.pdf");
+    }
+/*        public void jarPDF(){
+            InputStream jarPdf = getClass().getClassLoader().getResourceAsStream(Global.pdf$);
+//            System.out.println("Global.pdf$: " + Global.pdf$ + jarPdf.getClass()); // 
+                        try {
+                File pdfTemp = new File("Freon_et_al_FAO_Manuel_Climprod_1993.pdf");
+                // Extraction du PDF qui se situe dans l'archive
+                FileOutputStream fos = new FileOutputStream(pdfTemp);
+                while (jarPdf.available() > 0) {
+                      fos.write(jarPdf.read());
+                }   // while (pdfInJar.available() > 0)
+                fos.close();
+                // Ouverture du PDF
+                Desktop.getDesktop().open(pdfTemp);
+            }   // try
+                        catch (Exception ex) {
+        ex.printStackTrace();
+            }
+            }*/
+    
+    // get file from classpath, resources folder
+    private File getFileFromResources() {
+        ClassLoader classLoader = getClass().getClassLoader();
+        URL resource = classLoader.getResource(Global.pdf$);
+        System.out.println("resource = " + resource);
+        if (resource == null) {
+            throw new IllegalArgumentException("PDF file is not found!");
+        } else {
+            return new File(resource.getFile());
+        }
+    }  
     public void helpReferences_actionPerformed(ActionEvent e) {
 
         CadreMain_ReferencesBox dlg = new CadreMain_ReferencesBox(this);
@@ -623,7 +707,7 @@ public class CadreMain extends JFrame {
     void menuFileFolder_actionPerformed(ActionEvent e) {
 
         RapportHtml dlg = new RapportHtml(this, this.makeFaits());
-        dlg.setTitle("Climprod: Build a html & graphs folder ");
+        dlg.setTitle("Climprod: Build an html & graphs directory ");
         dlg.setModal(true);
         dlg.setVisible(true);
 		int d;
@@ -728,6 +812,7 @@ public class CadreMain extends JFrame {
             b5 = Global.test_jackknife; // Autorise sous-menu Use the model for prediction
         }
         this.jPanData.setVisible(b1);
+        this.menuFileOpenFolder.setEnabled(b1);
         this.menuFileFolder.setEnabled(b1);
         this.menuModels.setEnabled(b1);
         this.menuModelsResults.setEnabled(b2);
@@ -1213,11 +1298,7 @@ public class CadreMain extends JFrame {
                     menuItemOpenFolder_actionPerformed(e);
                 }
             });
-
             menuFileOpenFolder.add(menuItemOpenFolder[i]);
-
         }
-
     }
-
 }

src/fr/ird/climprod/resources/help/ACCEPTAB.HLP

@@ -12,13 +12,13 @@ the goodness of the fit. If your fishery is on a non-equilibrium situation
 (transitional state) with respect to E (several exploited year classes and
 an increasing effort, for instance) and/or with respect to V (influence of
 environment over several years) some points may be located outside the
-the two lines even in the case of a good fit. Look at the next graphs and
+two lines even in the case of a good fit. Look at the next graphs and
 next statistical results for goodness-of-fit estimation.
 
 In the case of the additive model: CPUE = a exp(b E) + c V + d, surprising
 results may be observed, such as an exponential growth of the production
-when effort is increasing, which is not a realistic predictive model (never-
-theless such a model may be used to describe the historical data).
+when effort is increasing, which is not a realistic predictive model 
+(nevertheless such a model may be used to describe the historical data).
 
 Answer YES if the general shape of the function corresponds to a reasonable
 modelization in your case.

src/fr/ird/climprod/resources/help/UNSTABILCPUE.HLP

-Is there a strong instability in the cpue time series?
+Is there a strong instability in the CPUE time series?
 
 Answer Yes if the CPUE time-series presents large fluctuations in a short
 time (over 100%, not autocorrelated, providing an erratic aspect of the plot).