Commit 0baceeda authored by peguerin's avatar peguerin
Browse files

supernova update

parent 9ba6675d
mkdir x_dir
scp -r peguerin@cluster-mbb.mbb.univ-montp2.fr:/share/reservebenefit/RAW/RESERVEBENEFIT/whole_genome_sequencing/wgs_serran/10Xgenomics x_dir/
## first try
nohup ./programmes/supernova-2.1.1/supernova run --id=serran --fastqs=~/rawdata/ --localmem=470 --maxreads=298666666 &
nohup /media/bigvol/peguerin/programmes/supernova-2.1.1/supernova mkoutput --style=pseudohap2 --asmdir=/media/bigvol/peguerin/serran/outs/assembly --outprefix=serranus &
## second try
\ No newline at end of file
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