Commit bf7e842f authored by peguerin's avatar peguerin
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table results

parent c3bcab0c
......@@ -99,37 +99,16 @@ fff
# Results
Species | Genome assembler | Computing platform | Library | # of contigs | Contig N50 | Total size
Species | Genome assembler | Computing platform | Library | # of contigs | Contig N50 | Total size
(Mbp) | # of scaffolds | Scaffold N50 | Coverage
--------------------|--------------------|----------------------|---------------------------------------------------------------------------|----------------|--------------|--------------------|------------------|----------------|----------
Diplodus sargus
| Platanus | MBB | Paired-end 350bp & 550bp insert size
Mate-pair 3Kbp & 5Kbp insert size
| 3030501 | 991 | 856 | 4227 | 2660334 | 53X
| Platanus | MESO@LR | | 2408078 | 1101 | 785 | 2344 | 3371708 | 57X
Mullus surmuletus
| Platanus | MBB | | 3616310 | 344 | 653 | 5417 | 192808 | 69X
| Platanus | MESO@LR | | 3146055 | 384 | 613 | 2940 | 488370 | 74X
| Abyss2 | MBB | | 36011115 | 96 | 686 | 4938 | 17739 | 66X
Serranus cabrilla
| Platanus | MBB | | 2169385 | 1135 | 627 | 2190 | 613541 | 63X
| Supernova | MESO@LR | Chromium
linked-reads | NA | NA | 223 *
-------------------|--------------------|----------------------|--------------------------------------------------------------------------|----------------|--------------|--------------------|------------------|----------------|----------
Diplodus sargus | Platanus | MBB | Paired-end 350bp & 550bp insert size Mate-pair 3Kbp & 5Kbp insert size | 3030501 | 991 | 856 | 4227 | 2660334 | 53X
Diplodus sargus | Platanus | MESO@LR | Paired-end 350bp & 550bp insert size Mate-pair 3Kbp & 5Kbp insert size | 2408078 | 1101 | 785 | 2344 | 3371708 | 57X
Mullus surmuletus | Platanus | MBB | Paired-end 350bp & 550bp insert size Mate-pair 3Kbp & 5Kbp insert size | 3616310 | 344 | 653 | 5417 | 192808 | 69X
Mullus surmuletus | Platanus | MESO@LR | Paired-end 350bp & 550bp insert size Mate-pair 3Kbp & 5Kbp insert size | 3146055 | 384 | 613 | 2940 | 488370 | 74X
Mullus surmuletus | Abyss2 | MBB | Paired-end 350bp & 550bp insert size Mate-pair 3Kbp & 5Kbp insert size | 36011115 | 96 | 686 | 4938 | 17739 | 66X
Serranus cabrilla | Platanus | MBB | Paired-end 350bp & 550bp insert size Mate-pair 3Kbp & 5Kbp insert size | 2169385 | 1135 | 627 | 2190 | 613541 | 63X
Serranus cabrilla | Supernova | MESO@LR | Chromium
Linked-reads | NA | NA | 223 *
| 4951 * | 67074 * |
| ARCS | MBB | Both | NA | NA | 627 | 2122 | 624679 | 63X
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Species | Genome assembler | Computing platform | Library | # of contigs | Contig N50 | Total size
(Mbp) | # of scaffolds | Scaffold N50 | Coverage
Diplodus sargus | Platanus | MBB | Paired-end 350bp & 550bp insert size | 3030501 | 991 | 856 | 4227 | 2660334 | 53X
| Platanus | MESO@LR | Mate-pair 3Kbp & 5Kbp insert size | 2408078 | 1101 | 785 | 2344 | 3371708 | 57X
Mullus surmuletus | Platanus | MBB | | 3616310 | 344 | 653 | 5417 | 192808 | 69X
| Platanus | MESO@LR | | 3146055 | 384 | 613 | 2940 | 488370 | 74X
| Abyss2 | MBB | | 36011115 | 96 | 686 | 4938 | 17739 | 66X
Serranus cabrilla | Platanus | MBB | | 2169385 | 1135 | 627 | 2190 | 613541 | 63X
| Supernova | MESO@LR | Chromium
Linked-reads | NA | NA | 223 *
| 4951 * | 67074 * |
| ARCS | MBB | Both | NA | NA | 627 | 2122 | 624679 | 63X
Serranus cabrilla | ARCS | MBB | Both | NA | NA | 627 | 2122 | 624679 | 63X
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