Commit 17cd06f2 authored by peguerin's avatar peguerin
Browse files

fix header vcf

parent fb3afbef
......@@ -10,7 +10,7 @@ intersect_vcf_annotation () {
bedtools intersect -wb -a $2 -b $3 | grep $4 | rev | cut -f10- | rev | uniq > $1_$4.bed
wait;
cat <(head $2) $1_$4.bed > $1_$4.vcf
cat <(grep "^#" $2) $1_$4.bed > $1_$4.vcf
}
# diplodus sargus
......
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