clean ddocent temp files

00-scripts/clean_ddocent_folder.sh

+cd 04-ddocent/mullus/
+rm reference.fasta.a*
+rm reference.fasta.*
+rm *RG.bam*
+rm *unique.seqs
+rm *uniq.seqs
+rm *R1.fq.gz
+rm *cov.stats
+rm uniq.*
+rm TotalRawSNPs.vcf 
+rm totalover.fasta 
+rm -Rf raw.vcf/
+rm totaluniqseq.gz 
+rm -Rf trim_reports/
+rm popmap 
+rm namelist 
+rm -Rf logfiles/
+rm genome.file 
+rm fastp.*
+rm dDocent*
+rm cov.split.stats 
+rm Final.recode.vcf 
+rm freebayes.error 
+rm bamlist.list
+rm nohup.out 
+rm mapped.bed 
+rm uniqCperindv 
+cd ../../