Commit 54a4a931 authored by peguerin's avatar peguerin
Browse files

singularity seaconnect

parent aabc824a
......@@ -6,8 +6,7 @@ Include: bash vim less man-db apt-utils tzdata
%environment
PATH="${PATH}":/usr/local/bin/bin/
LANGUAGE="en_US.UTF-8"
PATH="${PATH}":/usr/local/bin/bin/
%runscript
echo "Opening container...ubuntu xenial: freebayes, STACKS1, dDocent, parallel, gnuplot, mawk, VCFtools, VCFlib, trimmomatic, bwa, CD-HIT, samtools, bedtools, PEAR, fastp, seqtk, curl, wget, python2, java8"
......
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