Commit 8b8df8a4 authored by peguerin's avatar peguerin
Browse files

container is optional

parent a9e2bdcc
## species
#SPECIES=$1
## first argument is species name
SPECIES=$1
## second argument is container absolute path (optional)
CONTAINER=$2
## you can run demort.py without container (if it's already installed on your computer)
## the script detects if you provided a container or not
## DEmultiplexing MOnitoring Report Tool
if [ -z "$CONTAINER" ]
......
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