Commit d2088ade authored by peguerin's avatar peguerin
Browse files

readme update

parent f070b0be
# DDOCENT FOR SEACONNECT
[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active) [![Snakemake](https://img.shields.io/badge/snakemake-5.5.2-brightgreen.svg)](https://snakemake.bitbucket.io)
[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active) [![Snakemake](https://img.shields.io/badge/snakemake-5.5.2-brightgreen.svg)](https://snakemake.bitbucket.io) [![https://www.singularity-hub.org/static/img/hosted-singularity--hub-%23e32929.svg](https://www.singularity-hub.org/static/img/hosted-singularity--hub-%23e32929.svg)](https://singularity-hub.org/collections/3319)
Process Genotypage by Sequencing data with low coverage using a dDocent-based workflow. We performed this workflow as part of the [SEACONNECT project](https://reefish.umontpellier.fr/index.php?article9/total-seaconnect) on 900 samples among 2 fish species _mullus Surmuletus_ and _diplodus Sargus_ in Mediterranean sea.
......@@ -60,7 +60,7 @@ sudo singularity build seaconnect.simg Singularity.seaconnect
Pull a ready to run version of Singularity container
```
singularity pull --name seaconnect.simg shub://Grelot/............................;
singularity pull --name seaconnect.simg shub://Grelot/seaConnect--dDocent:seaconnect
```
......
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