Commit 8593bfc4 authored by peguerin's avatar peguerin

format snakemake

parent 036f2fcf
......@@ -14,7 +14,7 @@ rule illuminapairedend:
log:
'log/illuminapairedend/{run}.log'
params:
folderFastq=config['fastqFolderPath']
folderFastq=config['fastqFolderPath'],
s_min=config["illuminapairedend"]["s_min"]
shell:
'''illuminapairedend -r {params.folderFastq}{input.R2} {params.folderFastq}{input.R1} --score-min={params.s_min} > {output.fq} 2> {log}'''
......
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