... | @@ -74,8 +74,8 @@ graph TD; |
... | @@ -74,8 +74,8 @@ graph TD; |
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choice1b --> r1(illuminapairedend);
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choice1b --> r1(illuminapairedend);
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choice1a --> r1a(split_fastq);
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choice1a --> r1a(split_fastq);
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r1a --> id1a[`run`_`chunk` .fastq files]
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r1a --> id1a[`run`_`chunk` .fastq files]
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id1a --> r1a(chunk_illuminapairedend);
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id1a --> r2a(chunk_illuminapairedend);
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r1a --> r2(remove_unaligned);
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r2a --> r2(remove_unaligned);
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r1-->r2(remove_unaligned);
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r1-->r2(remove_unaligned);
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click r1 "https://gitlab.mbb.univ-montp2.fr/edna/snakemake_rapidrun_obitools/-/blob/master/02_assembly/rules/illuminapairedend.smk";
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click r1 "https://gitlab.mbb.univ-montp2.fr/edna/snakemake_rapidrun_obitools/-/blob/master/02_assembly/rules/illuminapairedend.smk";
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click r2 "https://gitlab.mbb.univ-montp2.fr/edna/snakemake_rapidrun_obitools/-/blob/master/02_assembly/rules/remove_unaligned.smk";
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click r2 "https://gitlab.mbb.univ-montp2.fr/edna/snakemake_rapidrun_obitools/-/blob/master/02_assembly/rules/remove_unaligned.smk";
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... | | ... | |