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edna
snakemake_rapidrun_swarm
Issues
Open
12
Closed
24
All
36
New issue
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Manual
Priority
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Title
remove run or projet or sample using a file
#1
· created
Feb 05, 2020
by
peguerin
enhancement
CLOSED
1
updated
Feb 06, 2020
demultiplexing steps: qual files
#2
· created
Feb 05, 2020
by
peguerin
bug
CLOSED
4
updated
Feb 06, 2020
Issue when running the pipeline on santamarta
#3
· created
Feb 12, 2020
by
vmarques
bug
CLOSED
1
6
updated
Jan 19, 2021
Ajouter base de ref custom
#4
· created
Feb 13, 2020
by
vmarques
enhancement
CLOSED
0
updated
Jun 04, 2021
Change name files in 06_ folder
#5
· created
Apr 16, 2020
by
vmarques
enhancement
CLOSED
6
updated
Jan 20, 2021
Erreur merging guadeloupe
#6
· created
Apr 17, 2020
by
vmarques
bug
CLOSED
5
updated
Oct 09, 2020
Erreur lancement clustering
#7
· created
Apr 24, 2020
by
vmarques
bug
CLOSED
5
updated
Apr 28, 2020
Ease the data download
#9
· created
Oct 09, 2020
by
vmarques
enhancement
CLOSED
1
updated
Jan 19, 2021
Re-write OTU_ py file python3
#11
· created
Dec 16, 2020
by
vmarques
bug
CLOSED
1
1
updated
Jan 19, 2021
Simplify data export
#12
· created
Dec 18, 2020
by
vmarques
enhancement
CLOSED
1
updated
Jan 20, 2021
subworkflow
#15
· created
Jan 12, 2021
by
peguerin
enhancement
CLOSED
0
updated
Jan 19, 2021
projetmarker snakemake a un message warning à verifier
#16
· created
Jan 19, 2021
by
peguerin
bug
CLOSED
1
updated
Jun 04, 2021
CLASSIC mode confuse {marker} and {run} wildcards
#17
· created
Jan 19, 2021
by
peguerin
bug
CLOSED
0
updated
Jan 19, 2021
Installation instruction
#18
· created
Jan 19, 2021
by
peguerin
documentation
CLOSED
1
updated
Jun 21, 2021
Test instruction
#19
· created
Jan 19, 2021
by
peguerin
documentation
CLOSED
1
updated
Jun 21, 2021
probleme demultiplexing
#24
· created
Feb 01, 2021
by
peguerin
bug
CLOSED
0
updated
Feb 11, 2021
error rule duplicate samples
#25
· created
Feb 10, 2021
by
vmarques
bug
CLOSED
4
updated
Feb 22, 2021
soigner la presentation et la doc
#26
· created
Feb 11, 2021
by
peguerin
documentation
CLOSED
2
updated
Jun 04, 2021
fastqc step
#27
· created
Feb 19, 2021
by
peguerin
enhancement
CLOSED
0
updated
Feb 23, 2021
error running one project
#28
· created
Feb 19, 2021
by
vmarques
bug
CLOSED
3
updated
Feb 22, 2021
error when running pipeline project
#31
· created
Feb 27, 2021
by
vmarques
bug
CLOSED
6
updated
Jun 04, 2021
Add multicore option for demultiplexing
#33
· created
Jun 04, 2021
by
vmarques
enhancement
CLOSED
4
updated
Jun 04, 2021
add documentation python script (description files)
#35
· created
Jun 04, 2021
by
vmarques
documentation
CLOSED
4
updated
Jun 21, 2021
taxonomic_assignment med_coastal lambda failed because nonetype object
#36
· created
Jun 07, 2021
by
peguerin
bug
CLOSED
3
updated
Jun 17, 2021