Explore projects

A program to detect potential cross contaminations in HTS assembled transcriptomes using expression level quantification

Tool to parse and summarize VFC files with different plots

Simulations of metabarcoding data from fish 12S Teleo1

A workflow designed to clean SINGLE-END fastq files

design primers for intrapopulation metabarcoding

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

Useful information about Rana temporaria genome and mitogenome. RADseq digestion, choices of restriction enzyme, RNA probe design

number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species

data test to check metabarcoding workflow processing