A workflow designed to clean SINGLE-END fastq files

design primers for intrapopulation metabarcoding

genepop

Ceci est un dépôt exemple pour git.

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

Useful information about Rana temporaria genome and mitogenome. RADseq digestion, choices of restriction enzyme, RNA probe design

number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species

data test to check metabarcoding workflow processing

metabarcoding test data for snakemake rapidrun workflow