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jlopez / wicopa
Apache License 2.0Web Interface for COntainer PAckaging.
This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.
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Un petit guide pour une utilisation des outils informatiques plus "responsable".
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web-app interface investigating database Barcode of Life BOLD geo referenced mitochondrial DNA barcode.
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This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.
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remy / OrthoFinder
GNU General Public License v3.0 onlyUpdated -
Comparison of multiple bioinformatic programs for each step of eDNA analysis
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Codes for the paper : "Genomic resources for Mediterranean fishes"
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remy / website_checks
MIT LicenseSome basic tests to check websites :
https certificates, checksum of the index web page, HTTP answers.Updated -
Seek positions of variants onto genome and check if they are on an annotated region e.g. coding region. Then seek the proteic function of the gene
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remy / BibEthique
Creative Commons Zero v1.0 UniversalThis project is aimed at providing a list of "Ethical' journals where ISEM's researchers are used to publishing there works.
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système expert de choix d’un modèle halieutique de production comportant une variable environnementale, puis ajustement et validation statistique du modèle.
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This project presents a pipeline based on OBITools commands in order to eliminate sequences interpreted as coming from PCR errors and to assign each remaining sequence to a taxon thanks to a reference database.
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Simulations of metabarcoding data from fish 12S Teleo1
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khalid / Dadi
BSD 3-Clause "New" or "Revised" LicenseThis fork implements two optimization functions : optimize_anneal and optimize_dual_anneal
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