Explore projects

This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.

web-app interface investigating database Barcode of Life BOLD geo referenced mitochondrial DNA barcode.

number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species

Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"

design primers for intrapopulation metabarcoding

Source code to fit a competitive Lotka-Volterra Model to tri-specific time series (using Rstan).

mandrill

A collection of scripts used to do genome assemblies from raw sequencing data

GSSA

Gillepsie SSA

Web Interface for COntainer PAckaging.

This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.

Rscripts and link to our server to download and assign environmental data to sample according to their coordinates