Explore projects

Scripts to prepare SNP data for analysis

This project aims to compare twelve bioinformatics pipelines based on five existing metabarcoding programs to make recommendations for data management in intraspecific variability studies using environmental DNA.

This project is aimed at providing a list of "Ethical' journals where ISEM's researchers are used to publishing there works.

Analysis around palinurus ortus

Say hello

Visualization of the specificity of designed primers with mismatch plot

Seek positions of variants onto genome and check if they are on an annotated region e.g. coding region. Then seek the proteic function of the gene

Using Git in a team: learn and practice Git and discover its features !

Understand the NCBI database and to do request using entrez and Rentrez

a shiny application to query information about our metabarcoding data

Useful information about Rana temporaria genome and mitogenome. RADseq digestion, choices of restriction enzyme, RNA probe design

This project has for goal to filtrate efficiently eDNA sequences after PCR amplification and NGS, in order to eliminate the false sequences generated by these technologies.