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DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species

data test to check metabarcoding workflow processing

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

Here is a version of the pipeline "only_obitools" using snakemake workflow management system.

Here we go again to investigate genetic diversity patterns at different scale

This fork implements two optimization functions : optimize_anneal and optimize_dual_anneal