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Source code to fit a competitive Lotka-Volterra Model to tri-specific time series (using Rstan).
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mmassaviol / MBB_MultiQC_plugin
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Simulations of metabarcoding data from fish 12S Teleo1
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mirror of modulefiles repository on gitlabpriv (but there is no reason to let this repository in a private state)
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Understand the NCBI database and to do request using entrez and Rentrez
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Here is a version of the pipeline "only_obitools" using nextflow, a reactive workflow framework and a programming DSL that eases writing computational pipelines with complex data.
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This project presents a pipeline based on OBITools commands in order to eliminate sequences interpreted as coming from PCR errors and to assign each remaining sequence to a taxon thanks to a reference database.
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