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OTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE

Formation R + git + Rmd

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

This project aims to compare twelve bioinformatics pipelines based on five existing metabarcoding programs to make recommendations for data management in intraspecific variability studies using environmental DNA.

Workflow Application Wrapper

Shiny App Generator

Scripts to prepare SNP data for analysis

This project is aimed at providing a list of "Ethical' journals where ISEM's researchers are used to publishing there works.

Analysis around palinurus ortus

Say hello

Visualization of the specificity of designed primers with mismatch plot

web-app interface investigating database Barcode of Life BOLD geo referenced mitochondrial DNA barcode.