Explore projects
-
aduhamet / snakemake_rapidrun_obitools
MIT LicenseDNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE
Updated -
peguerin / snakemake_rapidrun_obitools
MIT LicenseDNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE
Updated -
-
-
This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.
Updated -
-
khalid / radsex
GNU General Public License v3.0 onlyA version of radsex that can deal with indexed reads.
Updated -
Updated
-
Updated
-
Tool to check if a new version of an R package (you might be developing) breaks any package which depends on it.
Bash script and optional simple web interface to run R CMD CHECK on every package that depends on the package to test.
Updated -
Updated
-
Useful information about Rana temporaria genome and mitogenome. RADseq digestion, choices of restriction enzyme, RNA probe design
Updated -
This project permits to check the specificity of already designed primers.
Updated -
-
-
This repository is an adaptation of the poolDiffCNV repo. (https://github.com/andrewkern/poolDiffCNV).
Updated -
This project presents a pipeline based on OBITools commands in order to eliminate sequences interpreted as coming from PCR errors and to assign each remaining sequence to a taxon thanks to a reference database.
Updated -
Updated
-
Understand the NCBI database and to do request using entrez and Rentrez
Updated