Explore projects

Check WGS data

TP RocksCluster janvier 2016

Global determinants of freshwater and marine fish genetic diversity

This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.

Simulations of metabarcoding data from fish 12S Teleo1

Comparison of multiple bioinformatic programs for each step of eDNA analysis

GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"

A collection of scripts used to do genome assemblies from raw sequencing data

A workflow designed to clean SINGLE-END fastq files

Collections of mitogenome assembly methods from whole genome sequencing data

A way to setup LDAP synchronization fastly from a debian-like distro.

A program to detect potential cross contaminations in HTS assembled transcriptomes using expression level quantification