Explore projects

A tool designed to provide preprocessing for FASTQ files. This tool is developed in C++

A workflow designed to clean SINGLE-END fastq files

A collection of scripts used to do genome assemblies from raw sequencing data

mandrill

Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"

Source code to fit a competitive Lotka-Volterra Model to tri-specific time series (using Rstan).

GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

Comparison of multiple bioinformatic programs for each step of eDNA analysis

Simulations of metabarcoding data from fish 12S Teleo1

This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.

Global determinants of freshwater and marine fish genetic diversity

TP RocksCluster janvier 2016

système expert de choix d’un modèle halieutique de production comportant une variable environnementale, puis ajustement et validation statistique du modèle.

From https://github.com/davidemms/OrthoFinder

genepop