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edna / snakemake_rapidrun_obitools
MIT LicenseDNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE
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mirror of modulefiles repository on gitlabpriv (but there is no reason to let this repository in a private state)
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This project aims to compare twelve bioinformatics pipelines based on five existing metabarcoding programs to make recommendations for data management in intraspecific variability studies using environmental DNA.
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edna / reference_database
MIT LicenseCollection of scripts to build a reference database.
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scripts to create our own reference database with our own sequences only and using the NCBI taxonomy
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mmassaviol / MBB_MultiQC_plugin
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jlopez / wicopa
Apache License 2.0Web Interface for COntainer PAckaging.
This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.
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khalid / radsex
GNU General Public License v3.0 onlyA version of radsex that can deal with indexed reads.
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A SaltStack formula to check a list of services from pillar data.
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A SaltStack formula to setup roles and pool grains based on the subnet(s) and hostname.
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