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GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.
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This repository is an adaptation of the poolDiffCNV repo. (https://github.com/andrewkern/poolDiffCNV).
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Here we go again to investigate genetic diversity patterns at different scale
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remy / website_checks
MIT LicenseSome basic tests to check websites :
https certificates, checksum of the index web page, HTTP answers.Updated -
Comparison of multiple bioinformatic programs for each step of eDNA analysis
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Simulations of metabarcoding data from fish 12S Teleo1
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edna / snakemake_rapidrun_swarm
MIT LicenseOTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE
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système expert de choix d’un modèle halieutique de production comportant une variable environnementale, puis ajustement et validation statistique du modèle.
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edna / snakemake_rapidrun_obitools
MIT LicenseDNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE
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