Explore projects
-
This repository is an adaptation of the poolDiffCNV repo. (https://github.com/andrewkern/poolDiffCNV).
Updated -
-
-
-
This project permits to check the specificity of already designed primers.
Updated -
Visualization of the specificity of designed primers with mismatch plot
Updated -
Useful information about Rana temporaria genome and mitogenome. RADseq digestion, choices of restriction enzyme, RNA probe design
Updated -
Updated
-
edna / Quarto Create Dada2 Ref Database
MIT LicenseUpdated -
a shiny application to query information about our metabarcoding data
Updated -
Tool to check if a new version of an R package (you might be developing) breaks any package which depends on it.
Bash script and optional simple web interface to run R CMD CHECK on every package that depends on the package to test.
Updated -
Updated
-
Updated
-
khalid / radsex
GNU General Public License v3.0 onlyA version of radsex that can deal with indexed reads.
Updated -
-
edna / reference_database2
MIT LicenseUpdated -
-
Updated
-
This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.
Updated