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DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

Fork to change files copying to simple links

OTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE

Collection of scripts to build a reference database.

scripts to create our own reference database with our own sequences only and using the NCBI taxonomy

Web Interface for COntainer PAckaging.

This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.

Workflow Application Wrapper

Shiny App Generator

Code used by https://mbb.univ-montp2.fr/MBB/dnabushmeat