Explore projects

Here we go again to investigate genetic diversity patterns at different scale

Global determinants of freshwater and marine fish genetic diversity

Web Interface for COntainer PAckaging.

This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.

Workflow Application Wrapper

TP RocksCluster janvier 2016

data test to check metabarcoding workflow processing

number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species

OTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE

Here is a version of the pipeline "only_obitools" using snakemake workflow management system.

Shiny App Generator