TP RocksCluster janvier 2016
Shiny App Generator
Global determinants of freshwater and marine fish genetic diversity
Collection of scripts to build a reference database.
Workflow Application Wrapper
Web Interface for COntainer PAckaging.
This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.
A collection of scripts used to do genome assemblies from raw sequencing data
A workflow designed to clean SINGLE-END fastq files
Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"
number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species
This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.