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A collection of scripts used to do genome assemblies from raw sequencing data
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Codes Pierre-Edouard Guerin wrote for the scientific paper "Predicting genotype environmental range from genome–environment associations"
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Comparison of multiple bioinformatic programs for each step of eDNA analysis
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This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.
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Global determinants of freshwater and marine fish genetic diversity
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This repository is an adaptation of the poolDiffCNV repo. (https://github.com/andrewkern/poolDiffCNV).
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This fork implements two optimization functions : optimize_anneal and optimize_dual_anneal
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Here we go again to investigate genetic diversity patterns at different scale
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