Here we go again to investigate genetic diversity patterns at different scale
Global determinants of freshwater and marine fish genetic diversity
Web Interface for COntainer PAckaging.
This Web application allows people to generate Singularity recipe or Dockerfiles from a Web User Interface.
Workflow Application Wrapper
TP RocksCluster janvier 2016
data test to check metabarcoding workflow processing
number of SNPs, distance between consecutive loci (in bp) and number of SNPs located on a coding region for each species
OTU clustering with SWARM on RAPIDRUN data encapsulated in SNAKEMAKE
DNA Metabarcoding analyse on RAPIDRUN data with OBITOOLS encapsulated in SNAKEMAKE
Shiny App Generator
This workflow will use a pseudo aligner (Kallisto or Salmon) to quantify transcript abundance and test for differential expression.