... | ... | @@ -24,7 +24,13 @@ See [Installing MKBDR](https://gitlab.mbb.univ-montp2.fr/edna/custom_reference_d |
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If you have installed MKBDR, you can run the example data with:
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```
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need data test
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mkbdr init_ncbi_taxdump --folder_path arbre/nomcompres
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mkbdr init_ncbi_taxdump --folder_path nouveau/arbre/ --decompress
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mkbdr validate --fasta teleo_ok.fasta --output_prefix checked_teleo
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mkbdr curegen --database_globalnames 'Catalogue of Life' --output_prefix cure_teleo --fasta checked_teleo_faulty_taxon.fasta
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mkbdr validate --fasta teleo_ok.fasta --curate cure_teleo_curation.csv --output_prefix curated_teleo
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mkbdr validate --fasta teleo_ok.fasta --curate cure_teleo_curation.csv --ncbi_taxonomy_edition nouveau/arbre/ --output_prefix curated_teleo
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```
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