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* We concatenate `projet`/`marker`/`run`/`sample` .fasta files into `projet`/`marker`/`run` .fasta files
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* **05_assignment** produces `projet`/`marker`/`run` species occurence table files
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1. [Settings](###1-settings)
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0. Configuration
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1. Settings
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2. Assembly
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3. Demultiplexing
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4. Filtering
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5. Taxonomic assignment
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### 0 Configuration
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### 1 Settings
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```mermaid
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classDiagram
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